sim4-20030921-9-omv4000.x86_64.rpm


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Description

sim4 - Program to align cDNA and genomic DNA

Property Value
Distribution OpenMandriva Cooker
Repository OpenMandriva Unsupported Release x86_64
Package filename sim4-20030921-9-omv4000.x86_64.rpm
Package name sim4
Package version 20030921
Package release 9-omv4000
Package architecture x86_64
Package type rpm
Homepage -
License -
Maintainer -
Download size 48.99 KB
Installed size 84.81 KB
sim4 is a similarity-based tool for aligning an expressed DNA sequence
(EST, cDNA, mRNA) with a genomic sequence for the gene.
It also detects end matches when the two input sequences overlap at one end
(i.e., the start of one sequence overlaps the end of the other)
Reference for Sim4:
L. Florea, G. Hartzell, Z. Zhang, G. Rubin, and W. Miller (1998)
"A computer program for aligning a cDNA sequence with a genomic DNA sequence."
Genome Research 8, 967-974.

Alternatives

Package Version Architecture Repository
sim4-20030921-9-omv4000.i686.rpm 20030921 i686 OpenMandriva Unsupported Release
sim4 - - -

Requires

Name Value
libc.so.6(GLIBC_2.7)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
rtld(GNU_HASH) -

Provides

Name Value
sim4 = 20030921-9
sim4(x86-64) = 20030921-9

Download

Type URL
Mirror abf-downloads.openmandriva.org
Binary Package sim4-20030921-9-omv4000.x86_64.rpm
Source Package sim4-20030921-9.src.rpm

Install Howto

  1. Enable the repository in Software Repository Picker:
    # om-repo-picker
  2. Install sim4 rpm package:
    # dnf --refresh install sim4

Files

Path
/usr/bin/sim4
/usr/lib/.build-id/
/usr/lib/.build-id/59/e44938a45ccf84167d85aa1e59849365ad3a36
/usr/share/doc/sim4/COPYRIGHT
/usr/share/doc/sim4/README.sim4
/usr/share/doc/sim4/VERSION

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skinlf-javadoc-6.7-0.0.7-omv4000.noarch.rpm Javadoc for skinlf
skippy-0.5.0-9-omv4000.x86_64.rpm A full screen pager for X11
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