sim4-20030921-9-omv2015.0.x86_64.rpm


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Description

sim4 - Program to align cDNA and genomic DNA

Distribution: OpenMandriva Cooker
Repository: OpenMandriva Contrib x86_64
Package name: sim4
Package version: 20030921
Package release: 9-omv2015.0
Package architecture: x86_64
Package type: rpm
Installed size: 87.76 KB
Download size: 43.83 KB
Official Mirror: abf-downloads.openmandriva.org
sim4 is a similarity-based tool for aligning an expressed DNA sequence (EST, cDNA, mRNA) with a genomic sequence for the gene. It also detects end matches when the two input sequences overlap at one end (i.e., the start of one sequence overlaps the end of the other) Reference for Sim4: L. Florea, G. Hartzell, Z. Zhang, G. Rubin, and W. Miller (1998) "A computer program for aligning a cDNA sequence with a genomic DNA sequence." Genome Research 8, 967-974.

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Provides

  • sim4 == 20030921-9:2015.0

    Download

    Install Howto

    1. Enable OpenMandriva Contrib repository on Install and Remove Software"
    2. Update packages list:
      # urpmi.update -a
    3. Install sim4 rpm package:
      # urpmi sim4

    Files

    • /usr/bin/sim4
    • /usr/share/doc/sim4/COPYRIGHT
    • /usr/share/doc/sim4/README.sim4
    • /usr/share/doc/sim4/VERSION
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