readseq-19930201-9-omv2015.0.x86_64.rpm


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Description

readseq - Reads and writes nucleic/protein sequences in various formats

Distribution: OpenMandriva Cooker
Repository: OpenMandriva Contrib x86_64
Package name: readseq
Package version: 19930201
Package release: 9-omv2015.0
Package architecture: x86_64
Package type: rpm
Installed size: 96.44 KB
Download size: 37.84 KB
Official Mirror: abf-downloads.openmandriva.org
Readseq is a program for converting among several biosequence file formats, by D. Gilbert. These formats are currently understood by readseq: * ASN.1 format used by NCBI * DNAStrider, for common Mac program * EMBL, EMBL flatfile format * Fitch format, limited use * GCG, single sequence format of GCG software * GenBank/GB, genbank flatfile format * IG/Stanford, used by Intelligenetics and others * MSF multi sequence format used by GCG software * NBRF format * Olsen, format printed by Olsen VMS sequence editor. Input only. * PAUP's multiple sequence (NEXUS) format * Pearson/Fasta, a common format used by Fasta programs and others * Phylip3.2, sequential format for Phylip programs * Phylip, interleaved format for Phylip programs (v3.3, v3.4) * PIR/CODATA format used by PIR * Plain/Raw, sequence data only (no name, document, numbering) * Pretty print with various options for nice looking output. Output only. * Zuker format, limited use. Input only.

Alternatives

Provides

  • readseq == 19930201-9:2015.0

    Download

    Install Howto

    1. Enable OpenMandriva Contrib repository on Install and Remove Software"
    2. Update packages list:
      # urpmi.update -a
    3. Install readseq rpm package:
      # urpmi readseq

    Files

    • /usr/bin/readseq
    • /usr/share/doc/readseq/Formats
    • /usr/share/doc/readseq/Readme
    • /usr/share/doc/readseq/Readseq.help

    Changelog

    2012-12-11 - Alex Burmashev <alex.burmashev@rosalab.ru> 19930201-9 + Revision: f553d9d - merging with rosa2012.1 of project readseq

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