primer3-2.3.6-1-omv2015.0.x86_64.rpm


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Description

primer3 - PCR reactions primers identification

Property Value
Distribution OpenMandriva Cooker
Repository OpenMandriva Contrib x86_64
Package name primer3
Package version 2.3.6
Package release 1-omv2015.0
Package architecture x86_64
Package type rpm
Installed size 551.40 KB
Download size 144.36 KB
Official Mirror abf-downloads.openmandriva.org
Primer3 is a complete rewrite of the original PRIMER program
(Primer 0.5), written by Steve Lincoln, Mark Daly, and Eric
Lander.
Primer3 picks primers for PCR reactions, considering as criteria:
- oligonucleotide melting temperature, size, GC content,
and primer-dimer possibilities
- PCR product size
- positional constraints within the source sequence
- miscellaneous other constraints
All of these criteria are user-specifiable as constraints, and
some are specifiable as terms in an objective function that
characterizes an optimal primer pair.

Alternatives

Package Version Architecture Repository
primer3-2.3.6-1-omv2015.0.i586.rpm 2.3.6 i586 OpenMandriva Contrib
primer3 - - -

Requires

Name Value
libc.so.6()(64bit) -
libc.so.6(GLIBC_2.11)(64bit) -
libc.so.6(GLIBC_2.2.5)(64bit) -
libc.so.6(GLIBC_2.3.4)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libgcc_s.so.1(GCC_3.3.1)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -

Provides

Name Value
primer3 == 2.3.6-1:2015.0

Download

Type URL
Binary Package primer3-2.3.6-1-omv2015.0.x86_64.rpm
Source Package primer3-2.3.6-1.src.rpm

Install Howto

  1. Enable OpenMandriva Contrib repository on Install and Remove Software"
  2. Update packages list:
    # urpmi.update -a
  3. Install primer3 rpm package:
    # urpmi primer3

Files

Path
/usr/bin/long_seq_tm_test
/usr/bin/ntdpal
/usr/bin/ntthal
/usr/bin/oligotm
/usr/bin/primer3_core
/usr/share/doc/primer3/COPYING.txt
/usr/share/doc/primer3/example
/usr/share/doc/primer3/primer3_manual.htm
/usr/share/doc/primer3/primer3_v1_1_4_default_settings.txt
/usr/share/doc/primer3/primer3web_v0_4_0_default_settings.txt
/usr/share/doc/primer3/primer3web_v3_0_0_default_settings.txt
/usr/share/doc/primer3/primer3web_v4_0_0_default_settings.txt
/usr/share/doc/primer3/release_notes.txt

Changelog

2015-10-07 - Denis Silakov <dsilakov@gmail.com> 2.3.6-1
- (4e40194) Updated to 2.3.6

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prozilla-devel-2.0.4-9-omv2015.0.x86_64.rpm Header files and development files for prozilla
ps2eps-1.64-6-omv2015.0.x86_64.rpm Converts standard PostScript documents to EPS
psh-1.8.1-9-omv2015.0.noarch.rpm Developping for Perl Shell
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