tree-puzzle-5.2-6-omv2015.0.i586.rpm


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Description

tree-puzzle - Maximum likelihood analysis for nucleotide, amino acid and two-state data

Property Value
Distribution OpenMandriva Lx 3.0
Repository OpenMandriva Contrib Release i586
Package name tree-puzzle
Package version 5.2
Package release 6-omv2015.0
Package architecture i586
Package type rpm
Installed size 875.34 KB
Download size 538.00 KB
Official Mirror abf-downloads.openmandriva.org
TREE-PUZZLE is a computer program to reconstruct phylogenetic trees
from molecular sequence data by maximum likelihood. It implements a
fast tree search algorithm, quartet puzzling, that allows analysis
of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
In addition, TREE-PUZZLE offers a novel method, likelihood mapping,
to investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content
of a sequence alignment.

Alternatives

Package Version Architecture Repository
tree-puzzle-5.2-6-omv2015.0.x86_64.rpm 5.2 x86_64 OpenMandriva Contrib Release
tree-puzzle - - -

Requires

Name Value
libc.so.6 -
libc.so.6(GLIBC_2.0) -
libc.so.6(GLIBC_2.1) -
libc.so.6(GLIBC_2.3) -
libc.so.6(GLIBC_2.3.4) -
libc.so.6(GLIBC_2.4) -
libc.so.6(GLIBC_2.7) -
libm.so.6 -
libm.so.6(GLIBC_2.0) -

Provides

Name Value
tree-puzzle == 5.2-6:2015.0

Download

Type URL
Binary Package tree-puzzle-5.2-6-omv2015.0.i586.rpm
Source Package tree-puzzle-5.2-6.src.rpm

Install Howto

  1. Enable OpenMandriva Contrib Release repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install tree-puzzle rpm package:
    # urpmi tree-puzzle

Files

Path
/usr/bin/puzzle
/usr/share/doc/tree-puzzle/AUTHORS
/usr/share/doc/tree-puzzle/COPYING
/usr/share/doc/tree-puzzle/ChangeLog
/usr/share/doc/tree-puzzle/EF.3trees
/usr/share/doc/tree-puzzle/EF.phy
/usr/share/doc/tree-puzzle/README
/usr/share/doc/tree-puzzle/atp6.a
/usr/share/doc/tree-puzzle/globin.a
/usr/share/doc/tree-puzzle/globin.ctrees
/usr/share/doc/tree-puzzle/globin.trees
/usr/share/doc/tree-puzzle/marswolf.ctrees
/usr/share/doc/tree-puzzle/marswolf.n
/usr/share/doc/tree-puzzle/marswolf.trees
/usr/share/doc/tree-puzzle/primates.b
/usr/share/doc/tree-puzzle/primates.ctrees
/usr/share/doc/tree-puzzle/primates.trees
/usr/share/doc/tree-puzzle/tree-puzzle.pdf

Changelog

2012-12-11 - Alex Burmashev <alex.burmashev@rosalab.ru> 5.2-6
+ Revision: f168889
- merging with rosa2012.1 of project tree-puzzle

See Also

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trigger-rally-data-0.6.0-2-omv2015.0.noarch.rpm Data files for the Trigger rally racing game
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trn-3.6-21-omv2013.0.i586.rpm A news reader that displays postings in threaded format
trophy-1.1.6-1-omv2013.0.i586.rpm A 2D car racing action game for Linux
tryton-2.2.1-1-omv2013.0.noarch.rpm The client of the Tryton application platform
trytond-2.2.2-1-omv2013.0.noarch.rpm The server of the Tryton application platform
tsid-0.9-11-omv2015.0.i586.rpm Time SID Manager
tsid-devel-0.9-11-omv2015.0.i586.rpm Header files for compiling apps that use libtsid
tsocks-1.8-0.beta5.7-omv2013.0.i586.rpm A transparent SOCKS proxying library
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