sim4 - Program to align cDNA and genomic DNA

Property Value
Distribution OpenMandriva Lx 3.0
Repository OpenMandriva Contrib Release i586
Package name sim4
Package version 20030921
Package release 9-omv2015.0
Package architecture i586
Package type rpm
Installed size 82.47 KB
Download size 40.76 KB
Official Mirror
sim4 is a similarity-based tool for aligning an expressed DNA sequence
(EST, cDNA, mRNA) with a genomic sequence for the gene.
It also detects end matches when the two input sequences overlap at one end
(i.e., the start of one sequence overlaps the end of the other)
Reference for Sim4:
L. Florea, G. Hartzell, Z. Zhang, G. Rubin, and W. Miller (1998)
"A computer program for aligning a cDNA sequence with a genomic DNA sequence."
Genome Research 8, 967-974.


Package Version Architecture Repository
sim4-20030921-9-omv2015.0.x86_64.rpm 20030921 x86_64 OpenMandriva Contrib Release
sim4 - - -


Name Value - - - - - - - - -


Name Value
sim4 == 20030921-9:2015.0


Type URL
Binary Package sim4-20030921-9-omv2015.0.i586.rpm
Source Package sim4-20030921-9.src.rpm

Install Howto

  1. Enable OpenMandriva Contrib Release repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install sim4 rpm package:
    # urpmi sim4



See Also

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singular-devel-3.1.6-1-omv2014.1.i586.rpm Singular development files
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singular-examples-3.1.6-1-omv2014.1.i586.rpm Singular example files