hmmer-3.0-5-omv2015.0.i586.rpm


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Description

hmmer - Profile HMMs for protein sequence analysis

Property Value
Distribution OpenMandriva Lx 3.0
Repository OpenMandriva Contrib Release i586
Package name hmmer
Package version 3.0
Package release 5-omv2015.0
Package architecture i586
Package type rpm
Installed size 7.51 MB
Download size 1.23 MB
Official Mirror abf-downloads.openmandriva.org
Profile hidden Markov models (profile HMMs) can be used to do sensitive
database searching using statistical descriptions of a sequence family's
consensus. HMMER is a freely distributable implementation of profile HMM
software for protein sequence analysis.

Alternatives

Package Version Architecture Repository
hmmer-3.0-5-omv2015.0.x86_64.rpm 3.0 x86_64 OpenMandriva Contrib Release
hmmer - - -

Requires

Name Value
libc.so.6 -
libc.so.6(GLIBC_2.0) -
libc.so.6(GLIBC_2.1) -
libc.so.6(GLIBC_2.2) -
libc.so.6(GLIBC_2.3) -
libc.so.6(GLIBC_2.3.4) -
libc.so.6(GLIBC_2.4) -
libm.so.6 -
libm.so.6(GLIBC_2.0) -
libm.so.6(GLIBC_2.1) -
libmpi.so.1 -
libpthread.so.0 -
libpthread.so.0(GLIBC_2.0) -
libpthread.so.0(GLIBC_2.1) -
libpthread.so.0(GLIBC_2.3.2) -

Provides

Name Value
hmmer == 3.0-5:2015.0

Download

Type URL
Binary Package hmmer-3.0-5-omv2015.0.i586.rpm
Source Package hmmer-3.0-5.src.rpm

Install Howto

  1. Enable OpenMandriva Contrib Release repository on Install and Remove Software
  2. Update packages list:
    # urpmi.update -a
  3. Install hmmer rpm package:
    # urpmi hmmer

Files

Path
/usr/bin/hmmalign
/usr/bin/hmmbuild
/usr/bin/hmmconvert
/usr/bin/hmmemit
/usr/bin/hmmfetch
/usr/bin/hmmpress
/usr/bin/hmmscan
/usr/bin/hmmsearch
/usr/bin/hmmsim
/usr/bin/hmmstat
/usr/bin/jackhmmer
/usr/bin/phmmer
/usr/share/doc/hmmer/INSTALL
/usr/share/doc/hmmer/LICENSE
/usr/share/doc/hmmer/README
/usr/share/doc/hmmer/RELEASE-NOTES
/usr/share/doc/hmmer/Userguide.pdf
/usr/share/doc/hmmer/documentation/
/usr/share/doc/hmmer/documentation/man/boilerplate-tail
/usr/share/doc/hmmer/documentation/man/hmmalign.man
/usr/share/doc/hmmer/documentation/man/hmmbuild.man
/usr/share/doc/hmmer/documentation/man/hmmconvert.man
/usr/share/doc/hmmer/documentation/man/hmmemit.man
/usr/share/doc/hmmer/documentation/man/hmmer.man
/usr/share/doc/hmmer/documentation/man/hmmfetch.man
/usr/share/doc/hmmer/documentation/man/hmmpress.man
/usr/share/doc/hmmer/documentation/man/hmmscan.man
/usr/share/doc/hmmer/documentation/man/hmmsearch.man
/usr/share/doc/hmmer/documentation/man/hmmsim.man
/usr/share/doc/hmmer/documentation/man/hmmstat.man
/usr/share/doc/hmmer/documentation/man/jackhmmer.man
/usr/share/doc/hmmer/documentation/man/phmmer.man
/usr/share/doc/hmmer/tutorial/7LESS_DROME
/usr/share/doc/hmmer/tutorial/HBB_HUMAN
/usr/share/doc/hmmer/tutorial/Pkinase.hmm
/usr/share/doc/hmmer/tutorial/Pkinase.sto
/usr/share/doc/hmmer/tutorial/fn3.hmm
/usr/share/doc/hmmer/tutorial/fn3.out
/usr/share/doc/hmmer/tutorial/fn3.sto
/usr/share/doc/hmmer/tutorial/globins4.hmm
/usr/share/doc/hmmer/tutorial/globins4.out
/usr/share/doc/hmmer/tutorial/globins4.sto
/usr/share/doc/hmmer/tutorial/globins45.fa
/usr/share/doc/hmmer/tutorial/minifam
/usr/share/doc/hmmer/tutorial/minifam.h3f
/usr/share/doc/hmmer/tutorial/minifam.h3i
/usr/share/doc/hmmer/tutorial/minifam.h3m
/usr/share/doc/hmmer/tutorial/minifam.h3p
/usr/share/man/man1/hmmalign.1.xz
/usr/share/man/man1/hmmbuild.1.xz
/usr/share/man/man1/hmmconvert.1.xz
/usr/share/man/man1/hmmemit.1.xz
/usr/share/man/man1/hmmer.1.xz
/usr/share/man/man1/hmmfetch.1.xz
/usr/share/man/man1/hmmpress.1.xz
/usr/share/man/man1/hmmscan.1.xz
/usr/share/man/man1/hmmsearch.1.xz
/usr/share/man/man1/hmmsim.1.xz
/usr/share/man/man1/hmmstat.1.xz
/usr/share/man/man1/jackhmmer.1.xz
/usr/share/man/man1/phmmer.1.xz

See Also

Package Description
hocr-tools-20091007-2-omv2015.0.noarch.rpm Tools for manipulating and evaluating the hOCR format
horde-3.3.11-7-omv2015.0.noarch.rpm The Horde framework
horde-argv-0.1.0-26-omv2015.0.noarch.rpm Horde command-line argument parsing package
horde-auth-0.1.1-6-omv2015.0.noarch.rpm Horde Authentication API
horde-block-0.0.2-3-omv2013.0.noarch.rpm Horde Browser package
horde-browser-0.0.2-4-omv2015.0.noarch.rpm Horde Browser package
horde-cache-0.0.2-4-omv2015.0.noarch.rpm Caching API
horde-chora-2.1-11-omv2015.0.noarch.rpm The Horde CVS viewer
horde-cipher-0.0.2-5-omv2015.0.noarch.rpm Secret Encryption API
horde-cli-0.0.2-3-omv2015.0.noarch.rpm Horde CLI API
horde-compress-0.0.2-4-omv2015.0.noarch.rpm Horde Compression API
horde-datatree-0.0.3-4-omv2015.0.noarch.rpm DataTree API
horde-date-0.1.0-4-omv2015.0.noarch.rpm Horde Date package
horde-dimp-1.1.3-5-omv2015.0.noarch.rpm The Horde Dynamic Internet Messaging Program
horde-dom-0.1.0-3-omv2015.0.noarch.rpm Wrapper classes for PHP4 domxml compatibility using PHP5's dom functions
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